PhytophthoraV1, Main, Exploration, bibRecord, 000C32

Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni.

Identifieur interne : 000C32 ( Main/Exploration ); précédent : 000C31; suivant : 000C33

Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni.

Auteurs : Jaime Aguayo [France] ; Fabien Halkett [France] ; Claude Husson [France] ; Zoltán Nagy [Hongrie] ; András Szigethy [Hongrie] ; J Zsef Bakonyi [Hongrie] ; Pascal Frey [France] ; Benoit Marçais [France]

Source :

Applied and environmental microbiology [ 1098-5336 ] ; 2016.

RBID : pubmed:27736786

Descripteurs français

KwdFr :
- ADN mitochondrial (génétique), Alnus (microbiologie), Europe (MeSH), Génotype (MeSH), Hybridation génétique (MeSH), Maladies des plantes (microbiologie), Phylogenèse (MeSH), Phytophthora (classification), Phytophthora (génétique), Phytophthora (isolement et purification), Polyploïdie (MeSH), Répétitions microsatellites (MeSH), Variation génétique (MeSH).
MESH :
- génétique : ADN mitochondrial, Phytophthora.
- isolement et purification : Phytophthora.
- microbiologie : Alnus, Maladies des plantes.
- Europe, Génotype, Hybridation génétique, Phylogenèse, Polyploïdie, Répétitions microsatellites, Variation génétique.

English descriptors

KwdEn :
- Alnus (microbiology), DNA, Mitochondrial (genetics), Europe (MeSH), Genetic Variation (MeSH), Genotype (MeSH), Hybridization, Genetic (MeSH), Microsatellite Repeats (MeSH), Phylogeny (MeSH), Phytophthora (classification), Phytophthora (genetics), Phytophthora (isolation & purification), Plant Diseases (microbiology), Polyploidy (MeSH).
MESH :
- chemical , genetics : DNA, Mitochondrial.
- classification : Phytophthora.
- genetics : Phytophthora.
- isolation & purification : Phytophthora.
- microbiology : Alnus, Plant Diseases.
- Europe, Genetic Variation, Genotype, Hybridization, Genetic, Microsatellite Repeats, Phylogeny, Polyploidy.

Abstract

Assessing the process that gives rise to hybrid pathogens is central to understanding the evolution of emerging plant diseases. Phytophthora ×alni, a pathogen of alder, results from the homoploid hybridization of two related species, Phytophthora uniformis and Phytophthora ×multiformis Describing the genetic characteristics of P ×alni should help us understand how reproductive mechanisms and historical processes shaped the population structure of this emerging hybrid pathogen. The population genetic structure of P ×alni and the relationship with its parental species were investigated using 12 microsatellites and one mitochondrial DNA (mtDNA) marker on a European collection of 379 isolates. Populations of P ×alni were dominated by one multilocus genotype (MLG). The frequency of this dominant MLG increased after the disease emergence together with a decline in diversity, suggesting that it was favored by a genetic mechanism such as drift or selection. Combined microsatellite and mtDNA results confirmed that P ×alni originated from multiple hybridization events that involved different genotypes of the progenitors. Our detailed analyses point to a geographic structure that mirrors that observed for P. uniformis in Europe. The study provides more insights on the contribution of P. uniformis, an invasive species in Europe, to the emergence of Phytophthora-induced alder decline.

IMPORTANCE

Our study describes an original approach to assess the population genetics of polyploid organisms using microsatellite markers. By studying the parental subgenomes present in the interspecific hybrid P. ×alni, we were able to assess the geographical and temporal structure of European populations of the hybrid, shedding new light on the evolution of an emerging plant pathogen. In turn, the study of the parental subgenomes permitted us to assess some genetic characteristics of the parental species of P. ×alni, P. uniformis, and P ×multiformis, which are seldom sampled in nature. The subgenomes found in P. ×alni represent a picture of the "fossilized" diversity of the parental species.

DOI: 10.1128/AEM.02221-16
PubMed: 27736786
PubMed Central: PMC5118925

Affiliations:

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Le document en format XML

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<term>DNA, Mitochondrial (genetics)</term>
<term>Europe (MeSH)</term>
<term>Genetic Variation (MeSH)</term>
<term>Genotype (MeSH)</term>
<term>Hybridization, Genetic (MeSH)</term>
<term>Microsatellite Repeats (MeSH)</term>
<term>Phylogeny (MeSH)</term>
<term>Phytophthora (classification)</term>
<term>Phytophthora (genetics)</term>
<term>Phytophthora (isolation & purification)</term>
<term>Plant Diseases (microbiology)</term>
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<term>Alnus (microbiologie)</term>
<term>Europe (MeSH)</term>
<term>Génotype (MeSH)</term>
<term>Hybridation génétique (MeSH)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Phylogenèse (MeSH)</term>
<term>Phytophthora (classification)</term>
<term>Phytophthora (génétique)</term>
<term>Phytophthora (isolement et purification)</term>
<term>Polyploïdie (MeSH)</term>
<term>Répétitions microsatellites (MeSH)</term>
<term>Variation génétique (MeSH)</term>
</keywords>
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</keywords>
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<term>Phytophthora</term>
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</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Phytophthora</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Alnus</term>
<term>Maladies des plantes</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Alnus</term>
<term>Plant Diseases</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Europe</term>
<term>Genetic Variation</term>
<term>Genotype</term>
<term>Hybridization, Genetic</term>
<term>Microsatellite Repeats</term>
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<term>Polyploidy</term>
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<term>Génotype</term>
<term>Hybridation génétique</term>
<term>Phylogenèse</term>
<term>Polyploïdie</term>
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<front><div type="abstract" xml:lang="en">Assessing the process that gives rise to hybrid pathogens is central to understanding the evolution of emerging plant diseases. Phytophthora ×alni, a pathogen of alder, results from the homoploid hybridization of two related species, Phytophthora uniformis and Phytophthora ×multiformis Describing the genetic characteristics of P ×alni should help us understand how reproductive mechanisms and historical processes shaped the population structure of this emerging hybrid pathogen. The population genetic structure of P ×alni and the relationship with its parental species were investigated using 12 microsatellites and one mitochondrial DNA (mtDNA) marker on a European collection of 379 isolates. Populations of P ×alni were dominated by one multilocus genotype (MLG). The frequency of this dominant MLG increased after the disease emergence together with a decline in diversity, suggesting that it was favored by a genetic mechanism such as drift or selection. Combined microsatellite and mtDNA results confirmed that P ×alni originated from multiple hybridization events that involved different genotypes of the progenitors. Our detailed analyses point to a geographic structure that mirrors that observed for P. uniformis in Europe. The study provides more insights on the contribution of P. uniformis, an invasive species in Europe, to the emergence of Phytophthora-induced alder decline.</div>
<div type="abstract" xml:lang="en"><p><b>IMPORTANCE</b>
</p>
<p>Our study describes an original approach to assess the population genetics of polyploid organisms using microsatellite markers. By studying the parental subgenomes present in the interspecific hybrid P. ×alni, we were able to assess the geographical and temporal structure of European populations of the hybrid, shedding new light on the evolution of an emerging plant pathogen. In turn, the study of the parental subgenomes permitted us to assess some genetic characteristics of the parental species of P. ×alni, P. uniformis, and P ×multiformis, which are seldom sampled in nature. The subgenomes found in P. ×alni represent a picture of the "fossilized" diversity of the parental species.</p>
</div>
</front>
</TEI>
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<DateCompleted><Year>2017</Year>
<Month>11</Month>
<Day>07</Day>
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<Month>11</Month>
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<Title>Applied and environmental microbiology</Title>
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<ArticleTitle>Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni.</ArticleTitle>
<Pagination><MedlinePgn>7142-7153</MedlinePgn>
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<Abstract><AbstractText>Assessing the process that gives rise to hybrid pathogens is central to understanding the evolution of emerging plant diseases. Phytophthora ×alni, a pathogen of alder, results from the homoploid hybridization of two related species, Phytophthora uniformis and Phytophthora ×multiformis Describing the genetic characteristics of P ×alni should help us understand how reproductive mechanisms and historical processes shaped the population structure of this emerging hybrid pathogen. The population genetic structure of P ×alni and the relationship with its parental species were investigated using 12 microsatellites and one mitochondrial DNA (mtDNA) marker on a European collection of 379 isolates. Populations of P ×alni were dominated by one multilocus genotype (MLG). The frequency of this dominant MLG increased after the disease emergence together with a decline in diversity, suggesting that it was favored by a genetic mechanism such as drift or selection. Combined microsatellite and mtDNA results confirmed that P ×alni originated from multiple hybridization events that involved different genotypes of the progenitors. Our detailed analyses point to a geographic structure that mirrors that observed for P. uniformis in Europe. The study provides more insights on the contribution of P. uniformis, an invasive species in Europe, to the emergence of Phytophthora-induced alder decline.</AbstractText>
<AbstractText Label="IMPORTANCE">Our study describes an original approach to assess the population genetics of polyploid organisms using microsatellite markers. By studying the parental subgenomes present in the interspecific hybrid P. ×alni, we were able to assess the geographical and temporal structure of European populations of the hybrid, shedding new light on the evolution of an emerging plant pathogen. In turn, the study of the parental subgenomes permitted us to assess some genetic characteristics of the parental species of P. ×alni, P. uniformis, and P ×multiformis, which are seldom sampled in nature. The subgenomes found in P. ×alni represent a picture of the "fossilized" diversity of the parental species.</AbstractText>
<CopyrightInformation>Copyright © 2016, American Society for Microbiology. All Rights Reserved.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Aguayo</LastName>
<ForeName>Jaime</ForeName>
<Initials>J</Initials>
<Identifier Source="ORCID">0000-0002-7552-0655</Identifier>
<AffiliationInfo><Affiliation>ANSES, Laboratoire de la Santé des Végétaux, Unité de Mycologie, Malzéville, France.</Affiliation>
</AffiliationInfo>
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<ForeName>Fabien</ForeName>
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</AffiliationInfo>
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<ForeName>Claude</ForeName>
<Initials>C</Initials>
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</AffiliationInfo>
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<ForeName>Zoltán Á</ForeName>
<Initials>ZÁ</Initials>
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</AffiliationInfo>
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<ForeName>András</ForeName>
<Initials>A</Initials>
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</AffiliationInfo>
</Author>
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<ForeName>József</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>Plant Protection Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Frey</LastName>
<ForeName>Pascal</ForeName>
<Initials>P</Initials>
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<AffiliationInfo><Affiliation>UMR IAM, INRA, Université de Lorraine, Nancy, France.</Affiliation>
</AffiliationInfo>
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<ForeName>Benoit</ForeName>
<Initials>B</Initials>
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Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni.

Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni.

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